Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DXC16_17420 | Not Available | Positive | 3890535 - 3894062 | 131625.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXC16_17425 | Not Available | Positive | 3894084 - 3896006 | 73085.9 |
| sulfatase | DXC16_17430 | Not Available | Positive | 3896101 - 3897522 | 52951.9 |
| arylsulfatase | DXC16_17435 | Not Available | Positive | 3897633 - 3899159 | 57751.4 |
| abc transporter atp-binding protein | DXC16_17440 | Not Available | Positive | 3899416 - 3901008 | 59359.8 |
| glycoside hydrolase family 3 protein | DXC16_17445 | Not Available | Negative | 3901098 - 3903692 | 96045.1 |
| acetyl-coa hydrolase/transferase family protein | DXC16_17450 | Not Available | Negative | 3903878 - 3905371 | 54000.7 |
| hypothetical protein | DXC16_17455 | Not Available | Negative | 3905409 - 3905759 | 13516.5 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | DXC16_17460 | Not Available | Positive | 3906097 - 3907467 | 51936.9 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DXC16_17465 | Not Available | Positive | 3907467 - 3907868 | 15118.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

