Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase | DXC16_17370 | Not Available | Positive | 3869064 - 3869591 | 20715.6 |
| yitt family protein | DXC16_17375 | Not Available | Negative | 3869690 - 3870586 | 33215.4 |
| leucine--trna ligase | DXC16_17380 | Not Available | Negative | 3870668 - 3873502 | 108279.0 |
| hybrid sensor histidine kinase/response regulator | DXC16_17385 | Not Available | Positive | 3873870 - 3877853 | 152753.0 |
| duf4982 domain-containing protein | DXC16_17390 | Not Available | Positive | 3877993 - 3880431 | 92971.0 |
| tonb-dependent receptor | DXC16_17395 | Not Available | Positive | 3880465 - 3883518 | 113928.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXC16_17400 | Not Available | Positive | 3883533 - 3885314 | 68797.7 |
| protease | DXC16_17405 | Not Available | Negative | 3885381 - 3888605 | 120823.0 |
| rna polymerase sigma-70 factor | DXC16_17410 | Not Available | Positive | 3888784 - 3889371 | 22777.2 |
| fecr family protein | DXC16_17415 | Not Available | Positive | 3889460 - 3890470 | 38718.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

