Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 7-cyano-7-deazaguanine synthase quec | DXC16_17165 | Not Available | Negative | 3814281 - 3814949 | 24735.8 |
| vut family protein | DXC16_17170 | Not Available | Negative | 3815070 - 3815756 | 25083.7 |
| ornithine--oxo-acid transaminase | DXC16_17175 | Not Available | Negative | 3816045 - 3817280 | 45621.9 |
| amidinotransferase | DXC16_17180 | Not Available | Negative | 3817295 - 3818206 | 34260.9 |
| amidinotransferase | DXC16_17185 | Not Available | Negative | 3818229 - 3819149 | 35540.8 |
| endonuclease iii | DXC16_17190 | Not Available | Positive | 3819267 - 3819911 | 24101.6 |
| mbl fold metallo-hydrolase | DXC16_17195 | Not Available | Negative | 3819906 - 3820682 | 29140.4 |
| udp-n-acetylmuramate dehydrogenase | DXC16_17200 | Not Available | Negative | 3820691 - 3821704 | 37603.1 |
| duf4348 domain-containing protein | DXC16_17205 | Not Available | Negative | 3821716 - 3822576 | 33536.8 |
| phenylalanine--trna ligase subunit alpha | DXC16_17210 | Not Available | Positive | 3822688 - 3823722 | 38981.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

