Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3872 domain-containing protein | DXC16_17110 | Not Available | Positive | 3808354 - 3808812 | 17459.9 |
| hypothetical protein | DXC16_17115 | Not Available | Positive | 3808825 - 3809145 | 12423.6 |
| hypothetical protein | DXC16_17120 | Not Available | Negative | 3809349 - 3809831 | 18614.0 |
| duf3873 domain-containing protein | DXC16_17125 | Not Available | Negative | 3809843 - 3810064 | 8546.14 |
| antirestriction protein arda | DXC16_17130 | Not Available | Negative | 3810141 - 3810674 | 21138.6 |
| hypothetical protein | DXC16_17140 | Not Available | Negative | 3810968 - 3811168 | 7587.12 |
| orf6n domain-containing protein | DXC16_17145 | Not Available | Negative | 3811311 - 3811841 | 20331.8 |
| site-specific integrase | DXC16_17150 | Not Available | Negative | 3811926 - 3813155 | 46858.3 |
| Trna-ser | Not Available | Not Available | Positive | 3813429 - 3813516 | Not Available |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | DXC16_17160 | Not Available | Negative | 3813604 - 3814059 | 17765.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

