Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3876 domain-containing protein | DXC16_17060 | Not Available | Positive | 3800058 - 3800408 | 13366.1 |
| duf4141 domain-containing protein | DXC16_17065 | Not Available | Positive | 3800408 - 3800632 | 8082.93 |
| group ii intron reverse transcriptase/maturase | DXC16_17070 | Not Available | Positive | 3801183 - 3802988 | 70771.2 |
| conjugal transfer protein trai | DXC16_17075 | Not Available | Positive | 3802981 - 3803517 | 20190.4 |
| conjugative transposon protein traj | DXC16_17080 | Not Available | Positive | 3803537 - 3804532 | 36851.1 |
| conjugative transposon protein trak | DXC16_17085 | Not Available | Positive | 3804553 - 3805176 | 23898.7 |
| duf3989 domain-containing protein | DXC16_17090 | Not Available | Positive | 3805181 - 3805477 | 11542.0 |
| conjugative transposon protein tram | DXC16_17095 | Not Available | Positive | 3805455 - 3806786 | 48236.2 |
| conjugative transposon protein tran | DXC16_17100 | Not Available | Positive | 3806820 - 3807755 | 35223.5 |
| conjugal transfer protein | DXC16_17105 | Not Available | Positive | 3807759 - 3808340 | 21893.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

