Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh peroxidase | DXC16_16900 | Not Available | Positive | 3767303 - 3767854 | 20566.4 |
| thioredoxin | DXC16_16905 | Not Available | Negative | 3767958 - 3768416 | 16958.8 |
| thioredoxin | DXC16_16910 | Not Available | Negative | 3768420 - 3768716 | 11303.9 |
| omph family outer membrane protein | DXC16_16915 | Not Available | Negative | 3768835 - 3769449 | 23085.3 |
| hypothetical protein | DXC16_16920 | Not Available | Negative | 3769472 - 3769699 | 8190.17 |
| aminoacyl-histidine dipeptidase | DXC16_16925 | Not Available | Positive | 3769921 - 3771378 | 53122.6 |
| endonuclease | DXC16_16930 | Not Available | Positive | 3771384 - 3772394 | 38237.8 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | DXC16_16935 | Not Available | Negative | 3772471 - 3772944 | 18355.5 |
| carboxylating nicotinate-nucleotide diphosphorylase | DXC16_16940 | Not Available | Positive | 3773025 - 3773876 | 31272.2 |
| duf4923 family protein | DXC16_16950 | Not Available | Positive | 3774276 - 3774872 | 21522.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

