Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DXC16_16795 | Not Available | Positive | 3746207 - 3747487 | 47780.6 |
| abc transporter permease | DXC16_16800 | Not Available | Positive | 3747491 - 3748762 | 48153.1 |
| multidrug abc transporter substrate-binding protein | DXC16_16805 | Not Available | Positive | 3748785 - 3750041 | 47318.6 |
| abc transporter permease | DXC16_16810 | Not Available | Positive | 3750055 - 3751299 | 47857.9 |
| tolc family protein | DXC16_16815 | Not Available | Positive | 3751453 - 3752937 | 56980.8 |
| sigma-54-dependent fis family transcriptional regulator | DXC16_16820 | Not Available | Positive | 3753023 - 3754369 | 50380.1 |
| pas domain-containing protein | DXC16_16825 | Not Available | Positive | 3754400 - 3755695 | 49040.2 |
| hypothetical protein | DXC16_16830 | Not Available | Positive | 3755937 - 3756104 | 6557.93 |
| hypothetical protein | DXC16_16840 | Not Available | Positive | 3756756 - 3756944 | 6782.02 |
| hypothetical protein | DXC16_16845 | Not Available | Positive | 3756956 - 3757150 | 7666.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

