Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DXC16_16695 | Not Available | Negative | 3720608 - 3723631 | 111915.0 |
| duf1624 domain-containing protein | DXC16_16700 | Not Available | Negative | 3723707 - 3724825 | 41642.0 |
| alpha-n-acetylglucosaminidase | DXC16_16705 | Not Available | Negative | 3724833 - 3727097 | 87240.9 |
| hybrid sensor histidine kinase/response regulator | DXC16_16710 | Not Available | Negative | 3727180 - 3731400 | 162680.0 |
| winged helix dna-binding domain-containing protein | DXC16_16715 | Not Available | Negative | 3731593 - 3732645 | 40541.8 |
| cytidine deaminase | DXC16_16720 | Not Available | Negative | 3732642 - 3733121 | 17702.2 |
| hypothetical protein | DXC16_16725 | Not Available | Positive | 3733340 - 3733663 | 11453.6 |
| duf4476 domain-containing protein | DXC16_16730 | Not Available | Negative | 3733733 - 3734344 | 22961.6 |
| duf4476 domain-containing protein | DXC16_16735 | Not Available | Negative | 3734378 - 3735049 | 25502.9 |
| rna polymerase sigma factor | DXC16_16740 | Not Available | Positive | 3735357 - 3735893 | 21686.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

