Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DXC16_16645 | Not Available | Negative | 3699501 - 3701159 | 63057.9 |
| tonb-dependent receptor | DXC16_16650 | Not Available | Negative | 3701177 - 3704215 | 112371.0 |
| hypothetical protein | DXC16_16655 | Not Available | Negative | 3704238 - 3705737 | 56154.5 |
| hybrid sensor histidine kinase/response regulator | DXC16_16660 | Not Available | Positive | 3705951 - 3709991 | 153033.0 |
| histidine-type phosphatase | DXC16_16665 | Not Available | Negative | 3710239 - 3711978 | 66792.9 |
| glycoside hydrolase family 92 protein | DXC16_16670 | Not Available | Negative | 3711985 - 3714267 | 86313.1 |
| glycoside hydrolase family 28 protein | DXC16_16675 | Not Available | Negative | 3714270 - 3715682 | 52158.1 |
| glycoside hydrolase family 92 protein | DXC16_16680 | Not Available | Negative | 3715708 - 3718041 | 88755.1 |
| glycerophosphodiester phosphodiesterase | DXC16_16685 | Not Available | Negative | 3718061 - 3718873 | 31001.9 |
| ragb/susd family nutrient uptake outer membrane protein | DXC16_16690 | Not Available | Negative | 3718947 - 3720587 | 61732.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

