Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4837 family protein | DXC16_16405 | Not Available | Negative | 3637818 - 3638882 | 40606.1 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | DXC16_16410 | Not Available | Negative | 3638908 - 3639960 | 39667.2 |
| duf4922 domain-containing protein | DXC16_16415 | Not Available | Positive | 3640047 - 3642518 | 94515.1 |
| spoiid/lytb domain-containing protein | DXC16_16420 | Not Available | Positive | 3642575 - 3643891 | 49960.9 |
| mfs transporter | DXC16_16425 | Not Available | Positive | 3643949 - 3645223 | 47720.5 |
| hypothetical protein | DXC16_16435 | Not Available | Negative | 3645527 - 3646024 | 19111.2 |
| duf4251 domain-containing protein | DXC16_16440 | Not Available | Positive | 3646189 - 3646743 | 20119.4 |
| duf4251 domain-containing protein | DXC16_16445 | Not Available | Positive | 3646977 - 3647534 | 20164.2 |
| duf4136 domain-containing protein | DXC16_16450 | Not Available | Positive | 3647560 - 3648192 | 24210.4 |
| porin family protein | DXC16_16455 | Not Available | Positive | 3648205 - 3648843 | 24644.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

