Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_16305 | Not Available | Positive | 3621677 - 3622354 | 24504.2 |
| 6,7-dimethyl-8-ribityllumazine synthase | DXC16_16310 | Not Available | Positive | 3622447 - 3622953 | 18128.7 |
| Trna-tyr | Not Available | Not Available | Positive | 3623065 - 3623150 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3623157 - 3623232 | Not Available |
| pirin family protein | DXC16_16325 | Not Available | Positive | 3623403 - 3624107 | 26517.3 |
| hypothetical protein | DXC16_16330 | Not Available | Negative | 3624330 - 3624623 | 11293.8 |
| exodeoxyribonuclease iii | DXC16_16335 | Not Available | Negative | 3624780 - 3625535 | 29696.0 |
| preprotein translocase subunit secg | DXC16_16340 | Not Available | Negative | 3625699 - 3626064 | 12571.2 |
| tetratricopeptide repeat protein | DXC16_16345 | Not Available | Negative | 3626070 - 3626822 | 29436.1 |
| hypothetical protein | DXC16_16350 | Not Available | Negative | 3626839 - 3627366 | 19738.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

