Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_16205 | Not Available | Positive | 3605261 - 3605461 | 7356.05 |
| hypothetical protein | DXC16_16210 | Not Available | Positive | 3605501 - 3605707 | 8050.69 |
| atp-dependent dna helicase recq | DXC16_16215 | Not Available | Negative | 3605810 - 3608227 | 91736.1 |
| Trna-thr | Not Available | Not Available | Positive | 3608338 - 3608411 | Not Available |
| hypothetical protein | DXC16_16225 | Not Available | Positive | 3608416 - 3608664 | 9849.11 |
| duf4199 domain-containing protein | DXC16_16230 | Not Available | Positive | 3608671 - 3609204 | 20508.6 |
| glycosyltransferase | DXC16_16235 | Not Available | Positive | 3609208 - 3610161 | 36346.1 |
| hypothetical protein | DXC16_16240 | Not Available | Positive | 3610163 - 3610711 | 20757.9 |
| hypothetical protein | DXC16_16245 | Not Available | Positive | 3610659 - 3611360 | 26539.9 |
| manganese efflux pump | DXC16_16250 | Not Available | Positive | 3611364 - 3611936 | 21224.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

