Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphoesterase | DXC16_16155 | Not Available | Positive | 3590038 - 3590844 | 31244.2 |
| hypothetical protein | DXC16_16160 | Not Available | Positive | 3590810 - 3591571 | 30020.0 |
| oligopeptide transporter, opt family | DXC16_16165 | Not Available | Positive | 3591657 - 3593648 | 70025.6 |
| alpha/beta hydrolase | DXC16_16170 | Not Available | Positive | 3593682 - 3594527 | 30974.0 |
| alpha-rhamnosidase | DXC16_16175 | Not Available | Negative | 3594873 - 3596160 | 49155.6 |
| duf4038 domain-containing protein | DXC16_16180 | Not Available | Negative | 3596166 - 3597635 | 56349.4 |
| glycoside hydrolase family 88 protein | DXC16_16185 | Not Available | Negative | 3597786 - 3598985 | 45343.0 |
| glycoside hydrolase family 95 protein | DXC16_16190 | Not Available | Negative | 3599034 - 3601478 | 92085.9 |
| enolase | DXC16_16195 | Not Available | Positive | 3601644 - 3602939 | 46741.8 |
| aaa family atpase | DXC16_16200 | Not Available | Negative | 3603044 - 3604612 | 60563.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

