Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pspc domain-containing protein | DXC16_16105 | Not Available | Negative | 3580800 - 3581846 | 38214.5 |
| padr family transcriptional regulator | DXC16_16110 | Not Available | Negative | 3581859 - 3582185 | 12455.1 |
| gnat family n-acetyltransferase | DXC16_16115 | Not Available | Positive | 3582362 - 3582859 | 19318.5 |
| dna alkylation repair protein | DXC16_16120 | Not Available | Positive | 3582880 - 3583596 | 28304.2 |
| n-glycanase | DXC16_16125 | Not Available | Negative | 3583701 - 3584951 | 46726.9 |
| duf4301 family protein | DXC16_16130 | Not Available | Negative | 3585071 - 3586588 | 56797.3 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | DXC16_16135 | Not Available | Positive | 3586731 - 3588944 | 84511.3 |
| diacylglycerol kinase family protein | DXC16_16140 | Not Available | Positive | 3588966 - 3589319 | 12967.2 |
| duf1573 domain-containing protein | DXC16_16145 | Not Available | Positive | 3589414 - 3589827 | 14871.0 |
| hypothetical protein | DXC16_16150 | Not Available | Negative | 3589738 - 3589989 | 9902.94 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

