Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase | DXC16_16055 | Not Available | Negative | 3566115 - 3567509 | 53209.7 |
| glycosyltransferase family 1 protein | DXC16_16060 | Not Available | Negative | 3567528 - 3568793 | 47656.3 |
| 4-alpha-glucanotransferase | DXC16_16065 | Not Available | Negative | 3568808 - 3570748 | 74862.2 |
| rhomboid family intramembrane serine protease | DXC16_16070 | Not Available | Positive | 3570929 - 3571594 | 25309.2 |
| hypothetical protein | DXC16_16075 | Not Available | Positive | 3572214 - 3573548 | 50218.9 |
| peptidase m75 | DXC16_16080 | Not Available | Positive | 3573582 - 3574763 | 42831.0 |
| hypothetical protein | DXC16_16085 | Not Available | Positive | 3574782 - 3574979 | 7117.54 |
| hypothetical protein | DXC16_16090 | Not Available | Positive | 3575000 - 3576619 | 61475.8 |
| cytochrome c biogenesis protein | DXC16_16095 | Not Available | Positive | 3576739 - 3578991 | 86331.5 |
| formate-dependent phosphoribosylglycinamide formyltransferase | DXC16_16100 | Not Available | Negative | 3579533 - 3580702 | 42895.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

