Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | DXC16_01275 | Not Available | Negative | 238891 - 239724 | 32254.7 |
| site-specific integrase | DXC16_01280 | Not Available | Negative | 240343 - 241545 | 46794.8 |
| abc transporter atp-binding protein | DXC16_01285 | Not Available | Negative | 241629 - 243494 | 72108.0 |
| duf3805 domain-containing protein | DXC16_01290 | Not Available | Negative | 243502 - 244335 | 31633.2 |
| lactoylglutathione lyase | DXC16_01295 | Not Available | Negative | 244378 - 244755 | 14724.3 |
| mbl fold metallo-hydrolase | DXC16_01300 | Not Available | Negative | 244773 - 245564 | 30388.8 |
| hypothetical protein | DXC16_01305 | Not Available | Negative | 245574 - 246764 | 45188.1 |
| rida family protein | DXC16_01310 | Not Available | Negative | 246927 - 247304 | 13256.1 |
| transcription termination factor rho | DXC16_01315 | Not Available | Positive | 247732 - 249741 | 74254.4 |
| right-handed parallel beta-helix repeat-containing protein | DXC16_01320 | Not Available | Positive | 249854 - 251845 | 74695.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

