Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_16000 | Not Available | Positive | 3558322 - 3558678 | 13010.0 |
| diaminopimelate epimerase | DXC16_16005 | Not Available | Positive | 3558691 - 3558876 | 7191.76 |
| hypothetical protein | DXC16_16010 | Not Available | Positive | 3558891 - 3559616 | 25732.9 |
| atp-dependent dethiobiotin synthetase biod | DXC16_16020 | Not Available | Negative | 3560060 - 3560704 | 24302.0 |
| malonyl-[acyl-carrier protein] o-methyltransferase bioc | DXC16_16025 | Not Available | Negative | 3560719 - 3561474 | 28797.8 |
| duf452 family protein | DXC16_16030 | Not Available | Negative | 3561486 - 3562139 | 25130.3 |
| 8-amino-7-oxononanoate synthase | DXC16_16035 | Not Available | Negative | 3562136 - 3563287 | 43109.2 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | DXC16_16040 | Not Available | Negative | 3563315 - 3564586 | 47732.2 |
| biotin synthase biob | DXC16_16045 | Not Available | Negative | 3564625 - 3565584 | 35544.0 |
| hypothetical protein | DXC16_16050 | Not Available | Negative | 3565597 - 3565962 | 13987.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

