Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate dehydrogenase | DXC16_15950 | Not Available | Negative | 3544297 - 3545805 | 58278.9 |
| decarboxylating nadp(+)-dependent phosphogluconate dehydrogenase | DXC16_15955 | Not Available | Negative | 3545854 - 3547290 | 53142.1 |
| dicarboxylate/amino acid:cation symporter | DXC16_15960 | Not Available | Positive | 3547375 - 3548553 | 42069.5 |
| hypothetical protein | DXC16_15965 | Not Available | Negative | 3548758 - 3549927 | 45056.2 |
| l-asparaginase 2 | DXC16_15970 | Not Available | Negative | 3550015 - 3551073 | 37843.8 |
| anaerobic c4-dicarboxylate transporter | DXC16_15975 | Not Available | Negative | 3551241 - 3552539 | 45850.3 |
| nitronate monooxygenase | DXC16_15980 | Not Available | Positive | 3552781 - 3553731 | 34187.3 |
| sodium:solute symporter | DXC16_15985 | Not Available | Negative | 3553940 - 3555373 | 52090.3 |
| dihydrodipicolinate synthase family protein | DXC16_15990 | Not Available | Negative | 3555387 - 3556319 | 34028.5 |
| atp-binding cassette domain-containing protein | DXC16_15995 | Not Available | Negative | 3556482 - 3557930 | 55026.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

