Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DXC16_15900 | Not Available | Negative | 3533451 - 3534176 | 27866.9 |
| histidine kinase | DXC16_15905 | Not Available | Negative | 3534173 - 3535228 | 40206.2 |
| abc transporter permease | DXC16_15910 | Not Available | Negative | 3535422 - 3536642 | 44142.1 |
| abc transporter atp-binding protein | DXC16_15915 | Not Available | Negative | 3536661 - 3537404 | 27195.8 |
| efflux rnd transporter periplasmic adaptor subunit | DXC16_15920 | Not Available | Negative | 3537446 - 3538669 | 44030.8 |
| tolc family protein | DXC16_15925 | Not Available | Negative | 3538694 - 3540037 | 50274.4 |
| duf4492 domain-containing protein | DXC16_15930 | Not Available | Positive | 3540191 - 3540409 | 8685.8 |
| cytochrome ubiquinol oxidase subunit i | DXC16_15935 | Not Available | Positive | 3540433 - 3541935 | 55113.9 |
| cytochrome d ubiquinol oxidase subunit ii | DXC16_15940 | Not Available | Positive | 3542090 - 3543235 | 42798.5 |
| 6-phosphogluconolactonase | DXC16_15945 | Not Available | Negative | 3543531 - 3544235 | 26417.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

