Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metalloproteinase | DXC16_15845 | Not Available | Positive | 3523223 - 3523660 | 16695.8 |
| Trna-glu | Not Available | Not Available | Positive | 3524859 - 3524934 | Not Available |
| formate c-acetyltransferase | DXC16_15860 | Not Available | Positive | 3525138 - 3527366 | 84089.3 |
| pyruvate formate lyase-activating protein | DXC16_15865 | Not Available | Positive | 3527435 - 3528163 | 28010.6 |
| hypothetical protein | DXC16_15870 | Not Available | Negative | 3528265 - 3528852 | 21700.1 |
| lactate utilization protein | DXC16_15875 | Not Available | Negative | 3528856 - 3530223 | 51567.5 |
| (fe-s)-binding protein | DXC16_15880 | Not Available | Negative | 3530220 - 3530960 | 27278.1 |
| dna-binding response regulator | DXC16_15885 | Not Available | Negative | 3531272 - 3531883 | 22691.8 |
| hemerythrin domain-containing protein | DXC16_15890 | Not Available | Negative | 3531880 - 3532575 | 27000.4 |
| tryptophan-rich sensory protein | DXC16_15895 | Not Available | Negative | 3532702 - 3533166 | 18119.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

