Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4968 domain-containing protein | DXC16_15640 | Not Available | Negative | 3456158 - 3458542 | 91754.6 |
| glycoside hydrolase family 2 | DXC16_15645 | Not Available | Negative | 3458556 - 3461924 | 126868.0 |
| beta-glycosidase | DXC16_15650 | Not Available | Negative | 3461927 - 3464956 | 114401.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXC16_15655 | Not Available | Negative | 3465042 - 3466730 | 64111.6 |
| susc/raga family tonb-linked outer membrane protein | DXC16_15660 | Not Available | Negative | 3466749 - 3470048 | 122190.0 |
| fecr family protein | DXC16_15665 | Not Available | Negative | 3470104 - 3471036 | 35880.6 |
| rna polymerase sigma-70 factor | DXC16_15670 | Not Available | Negative | 3471107 - 3471670 | 22518.2 |
| carbohydrate esterase | DXC16_15675 | Not Available | Negative | 3471735 - 3473255 | 55706.4 |
| hypothetical protein | DXC16_15680 | Not Available | Negative | 3473318 - 3475864 | 94970.7 |
| glycoside hydrolase | DXC16_15690 | Not Available | Negative | 3476408 - 3478396 | 75029.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

