Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase obge | DXC16_15590 | Not Available | Positive | 3446572 - 3447756 | 44180.3 |
| peptidoglycan editing factor pgef | DXC16_15595 | Not Available | Positive | 3447753 - 3448535 | 28811.3 |
| hypothetical protein | DXC16_15600 | Not Available | Positive | 3448575 - 3449234 | 24369.2 |
| m23 family peptidase | DXC16_15605 | Not Available | Positive | 3449244 - 3449867 | 22827.6 |
| hypothetical protein | DXC16_15610 | Not Available | Positive | 3449871 - 3450062 | 6973.57 |
| porin family protein | DXC16_15615 | Not Available | Positive | 3450267 - 3450803 | 19636.2 |
| port family protein | DXC16_15620 | Not Available | Positive | 3451007 - 3451612 | 21310.4 |
| port family protein | DXC16_15625 | Not Available | Positive | 3451758 - 3452429 | 24189.6 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase | DXC16_15630 | Not Available | Negative | 3452527 - 3453702 | 43918.3 |
| hypothetical protein | DXC16_15635 | Not Available | Negative | 3454140 - 3456140 | 74937.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

