Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | DXC16_15540 | Not Available | Positive | 3433271 - 3434386 | 40051.3 |
| acrb/acrd/acrf family protein | DXC16_15545 | Not Available | Positive | 3434395 - 3437610 | 117297.0 |
| tolc family protein | DXC16_15550 | Not Available | Positive | 3437607 - 3438980 | 50351.8 |
| duf4934 domain-containing protein | DXC16_15555 | Not Available | Negative | 3439061 - 3440293 | 46077.8 |
| duf3332 domain-containing protein | DXC16_15560 | Not Available | Negative | 3440374 - 3440925 | 19885.5 |
| mfs transporter | DXC16_15565 | Not Available | Positive | 3441099 - 3442487 | 51177.4 |
| duf4831 family protein | DXC16_15570 | Not Available | Negative | 3442569 - 3443618 | 38672.6 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | DXC16_15575 | Not Available | Negative | 3443655 - 3445190 | 56235.6 |
| hypoxanthine phosphoribosyltransferase | DXC16_15580 | Not Available | Positive | 3445310 - 3445846 | 20092.5 |
| adenylate kinase | DXC16_15585 | Not Available | Positive | 3445887 - 3446456 | 20885.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

