Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DXC16_01220 | Not Available | Negative | 226884 - 227771 | 34579.0 |
| hypothetical protein | DXC16_01225 | Not Available | Negative | 227785 - 229032 | 48523.0 |
| glycosyltransferase | DXC16_01230 | Not Available | Negative | 229490 - 230596 | 42039.0 |
| glycosyltransferase | DXC16_01235 | Not Available | Negative | 230642 - 231352 | 27191.6 |
| hypothetical protein | DXC16_01240 | Not Available | Negative | 231553 - 232509 | 37560.8 |
| hypothetical protein | DXC16_01245 | Not Available | Negative | 232506 - 233828 | 49243.7 |
| glycosyltransferase family 1 protein | DXC16_01250 | Not Available | Negative | 233834 - 235078 | 48342.5 |
| licd family protein | DXC16_01255 | Not Available | Negative | 235005 - 235934 | 36470.3 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | DXC16_01260 | Not Available | Negative | 235931 - 236650 | 26955.6 |
| ctp--phosphocholine cytidylyltransferase/choline kinase | DXC16_01265 | Not Available | Negative | 236657 - 238237 | 61751.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

