Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s9 | DXC16_15335 | Not Available | Positive | 3391738 - 3392124 | 14527.7 |
| 30s ribosomal protein s2 | DXC16_15340 | Not Available | Positive | 3392257 - 3393096 | 30564.9 |
| elongation factor ts | DXC16_15345 | Not Available | Positive | 3393229 - 3394218 | 35504.8 |
| translation initiation factor | DXC16_15350 | Not Available | Negative | 3394277 - 3394615 | 12663.2 |
| redox-sensing transcriptional repressor rex | DXC16_15355 | Not Available | Positive | 3394733 - 3395383 | 24251.6 |
| faa hydrolase family protein | DXC16_15360 | Not Available | Positive | 3395388 - 3396005 | 23340.1 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | DXC16_15365 | Not Available | Positive | 3396002 - 3396484 | 17475.2 |
| 1,4-dihydroxy-2-naphthoate polyprenyltransferase | DXC16_15370 | Not Available | Negative | 3396535 - 3397425 | 32692.7 |
| metallophosphoesterase | DXC16_15375 | Not Available | Positive | 3397499 - 3398338 | 31352.6 |
| duf3836 domain-containing protein | DXC16_15380 | Not Available | Positive | 3398566 - 3399036 | 18198.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

