Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_15280 | Not Available | Positive | 3377955 - 3378146 | 7501.54 |
| response regulator | DXC16_15285 | Not Available | Positive | 3378168 - 3382229 | 155202.0 |
| mate family efflux transporter | DXC16_15295 | Not Available | Positive | 3383385 - 3384734 | 49665.5 |
| adenylosuccinate lyase | DXC16_15300 | Not Available | Positive | 3384828 - 3386174 | 50932.1 |
| pseudouridine synthase | DXC16_15305 | Not Available | Positive | 3386250 - 3387716 | 56182.9 |
| asparagine--trna ligase | DXC16_15310 | Not Available | Positive | 3387739 - 3389142 | 53432.1 |
| duf4488 domain-containing protein | DXC16_15315 | Not Available | Positive | 3389305 - 3389799 | 18600.8 |
| zeta toxin | DXC16_15320 | Not Available | Positive | 3390160 - 3390735 | 21483.9 |
| hypothetical protein | DXC16_15325 | Not Available | Positive | 3390725 - 3390970 | 9041.7 |
| 50s ribosomal protein l13 | DXC16_15330 | Not Available | Positive | 3391270 - 3391731 | 17129.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

