Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_15230 | Not Available | Positive | 3360748 - 3360930 | 6168.02 |
| dna-binding response regulator | DXC16_15235 | Not Available | Negative | 3361006 - 3361704 | 26811.6 |
| sensor histidine kinase | DXC16_15240 | Not Available | Negative | 3361706 - 3363274 | 59676.4 |
| elongation factor g | DXC16_15245 | Not Available | Negative | 3363537 - 3365696 | 80535.6 |
| radical sam family heme chaperone hemw | DXC16_15250 | Not Available | Positive | 3365933 - 3367063 | 43549.6 |
| sialate o-acetylesterase | DXC16_15255 | Not Available | Negative | 3367217 - 3369154 | 72324.6 |
| alpha-glucuronidase | DXC16_15260 | Not Available | Negative | 3369182 - 3371227 | 77280.2 |
| glycosyhydrolase | DXC16_15265 | Not Available | Negative | 3371224 - 3373818 | 99402.6 |
| glycoside hydrolase | DXC16_15270 | Not Available | Negative | 3373831 - 3375414 | 60270.6 |
| glycoside hydrolase | DXC16_15275 | Not Available | Negative | 3375423 - 3377930 | 94279.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

