Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam protein | DXC16_15180 | Not Available | Negative | 3352505 - 3353386 | 33132.9 |
| glycosyltransferase family 2 protein | DXC16_15185 | Not Available | Negative | 3353474 - 3354499 | 39378.6 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | DXC16_15190 | Not Available | Negative | 3354535 - 3355851 | 49152.8 |
| long-chain fatty acid--coa ligase | DXC16_15195 | Not Available | Positive | 3355957 - 3357630 | 63271.5 |
| hypothetical protein | DXC16_15200 | Not Available | Positive | 3357791 - 3357991 | 6663.71 |
| hypothetical protein | DXC16_15205 | Not Available | Positive | 3358146 - 3358838 | 26978.2 |
| 50s ribosomal protein l9 | DXC16_15210 | Not Available | Negative | 3358908 - 3359351 | 16159.9 |
| 30s ribosomal protein s18 | DXC16_15215 | Not Available | Negative | 3359367 - 3359636 | 10561.2 |
| 30s ribosomal protein s6 | DXC16_15220 | Not Available | Negative | 3359639 - 3359983 | 13428.3 |
| marr family transcriptional regulator | DXC16_15225 | Not Available | Positive | 3360193 - 3360639 | 17228.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

