Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_15130 | Not Available | Negative | 3339255 - 3339599 | 12868.6 |
| hypothetical protein | DXC16_15135 | Not Available | Negative | 3339645 - 3339872 | 8722.8 |
| transporter | DXC16_15140 | Not Available | Negative | 3340055 - 3341011 | 35439.4 |
| n-acetylmuramoyl-l-alanine amidase | DXC16_15145 | Not Available | Positive | 3341168 - 3342397 | 46293.8 |
| mce family protein | DXC16_15150 | Not Available | Positive | 3342417 - 3343304 | 32671.6 |
| chromosomal replication initiator protein dnaa | DXC16_15155 | Not Available | Positive | 3343642 - 3345048 | 53559.4 |
| nadph-dependent oxidoreductase | DXC16_15160 | Not Available | Negative | 3345133 - 3345873 | 28380.1 |
| adenosylcobalamin-dependent ribonucleoside-diphosphate reductase | DXC16_15165 | Not Available | Positive | 3346217 - 3348763 | 96377.2 |
| hypothetical protein | DXC16_15170 | Not Available | Negative | 3348856 - 3351828 | 110731.0 |
| dihydroneopterin aldolase | DXC16_15175 | Not Available | Positive | 3351990 - 3352358 | 13945.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

