Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf262 domain-containing protein | DXC16_15025 | Not Available | Negative | 3319562 - 3321301 | 68076.5 |
| xre family transcriptional regulator | DXC16_15030 | Not Available | Negative | 3321369 - 3321572 | 7754.65 |
| hypothetical protein | DXC16_15040 | Not Available | Negative | 3323048 - 3324715 | 64807.9 |
| alpha/beta hydrolase | DXC16_15045 | Not Available | Positive | 3324981 - 3325850 | 32862.5 |
| hypothetical protein | DXC16_15050 | Not Available | Positive | 3326215 - 3326502 | 10636.0 |
| sugar o-acetyltransferase | DXC16_15055 | Not Available | Positive | 3326517 - 3327092 | 20877.8 |
| hypothetical protein | DXC16_15060 | Not Available | Negative | 3327114 - 3327293 | 6327.56 |
| alpha/beta hydrolase | DXC16_15065 | Not Available | Positive | 3327575 - 3328630 | 39316.1 |
| duf3737 family protein | DXC16_15070 | Not Available | Positive | 3328746 - 3329612 | 33228.2 |
| pyridoxal phosphate-dependent aminotransferase | DXC16_15075 | Not Available | Positive | 3329622 - 3330785 | 44389.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

