Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3987 domain-containing protein | DXC16_01170 | Not Available | Positive | 217542 - 219347 | 67498.1 |
| duf4248 domain-containing protein | DXC16_01175 | Not Available | Positive | 219739 - 219933 | 7367.08 |
| hypothetical protein | DXC16_01180 | Not Available | Positive | 220032 - 220262 | 8498.24 |
| dna-binding protein | DXC16_01185 | Not Available | Positive | 220302 - 220796 | 18040.5 |
| n-acetylmuramoyl-l-alanine amidase | DXC16_01190 | Not Available | Positive | 221188 - 221706 | 19565.6 |
| hypothetical protein | DXC16_01195 | Not Available | Negative | 221965 - 222939 | 37140.2 |
| hypothetical protein | DXC16_01200 | Not Available | Negative | 223017 - 223826 | 31145.5 |
| nad(p)-dependent oxidoreductase | DXC16_01205 | Not Available | Negative | 223823 - 224836 | 37885.7 |
| udp-galactopyranose mutase | DXC16_01210 | Not Available | Negative | 224887 - 226023 | 43995.4 |
| duf4422 domain-containing protein | DXC16_01215 | Not Available | Negative | 226070 - 226849 | 31037.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

