Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family hydrolase | DXC16_14960 | Not Available | Positive | 3301039 - 3301689 | 24626.3 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | DXC16_14965 | Not Available | Positive | 3301742 - 3302563 | 29550.9 |
| mfs transporter | DXC16_14970 | Not Available | Positive | 3302578 - 3303744 | 43869.8 |
| energy-dependent translational throttle protein etta | DXC16_14975 | Not Available | Positive | 3303782 - 3305470 | 63699.2 |
| tonb-dependent receptor | DXC16_14980 | Not Available | Positive | 3305840 - 3309181 | 123070.0 |
| hypothetical protein | DXC16_14985 | Not Available | Negative | 3309197 - 3309523 | 12486.1 |
| integrase | DXC16_14995 | Not Available | Negative | 3311438 - 3312241 | 31555.3 |
| duf1016 domain-containing protein | DXC16_15010 | Not Available | Negative | 3314236 - 3315366 | 44049.9 |
| sam-dependent dna methyltransferase | DXC16_15015 | Not Available | Negative | 3315370 - 3316788 | 53124.5 |
| dead/deah box helicase | DXC16_15020 | Not Available | Negative | 3316793 - 3319495 | 102533.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

