Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | DXC16_14910 | Not Available | Positive | 3289982 - 3290818 | 32737.6 |
| duf417 domain-containing protein | DXC16_14915 | Not Available | Positive | 3290911 - 3291501 | 21267.4 |
| do family serine endopeptidase | DXC16_14920 | Not Available | Positive | 3291824 - 3293347 | 53839.6 |
| rna polymerase sigma factor rpod/siga | DXC16_14925 | Not Available | Positive | 3293587 - 3294447 | 32805.3 |
| hypothetical protein | DXC16_14930 | Not Available | Positive | 3294669 - 3295064 | 15100.5 |
| clostripain | DXC16_14935 | Not Available | Positive | 3295075 - 3296337 | 46725.4 |
| hypothetical protein | DXC16_14940 | Not Available | Negative | 3296321 - 3296719 | 15031.6 |
| divalent metal cation transporter | DXC16_14945 | Not Available | Positive | 3296822 - 3298075 | 45774.1 |
| potassium/proton antiporter | DXC16_14950 | Not Available | Negative | 3298152 - 3299600 | 52867.7 |
| mate family efflux transporter | DXC16_14955 | Not Available | Negative | 3299597 - 3300949 | 49446.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

