Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional metallophosphatase/5'-nucleotidase | DXC16_14860 | Not Available | Positive | 3270107 - 3271849 | 65562.8 |
| hypothetical protein | DXC16_14865 | Not Available | Positive | 3271854 - 3272192 | 12711.8 |
| tonb-dependent receptor | DXC16_14870 | Not Available | Positive | 3272326 - 3274659 | 87223.8 |
| kama family protein | DXC16_14875 | Not Available | Negative | 3274748 - 3276859 | 81888.1 |
| hypothetical protein | DXC16_14880 | Not Available | Negative | 3276934 - 3277143 | 8280.6 |
| six-hairpin glycosidase | DXC16_14885 | Not Available | Positive | 3277179 - 3280490 | 126710.0 |
| hydrolase | DXC16_14890 | Not Available | Positive | 3280542 - 3283298 | 104391.0 |
| glycoside hydrolase family 28 protein | DXC16_14895 | Not Available | Positive | 3283365 - 3284696 | 49439.7 |
| hypothetical protein | DXC16_14900 | Not Available | Positive | 3284705 - 3286045 | 49757.6 |
| response regulator | DXC16_14905 | Not Available | Negative | 3286507 - 3289644 | 119564.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

