Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DXC16_14750 | Not Available | Positive | 3246373 - 3248532 | 82000.7 |
| duf4625 domain-containing protein | DXC16_14755 | Not Available | Positive | 3248529 - 3249023 | 18097.2 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | DXC16_14760 | Not Available | Positive | 3249291 - 3250577 | 46224.8 |
| l-lactate permease | DXC16_14765 | Not Available | Positive | 3250843 - 3252342 | 53068.6 |
| histone h1 | DXC16_14770 | Not Available | Positive | 3252513 - 3252686 | 6352.79 |
| duf5113 domain-containing protein | DXC16_14775 | Not Available | Positive | 3252835 - 3257232 | 168918.0 |
| dna-binding response regulator | DXC16_14780 | Not Available | Positive | 3257262 - 3257990 | 27616.5 |
| transporter | DXC16_14785 | Not Available | Positive | 3257980 - 3258696 | 27014.7 |
| Trna-arg | Not Available | Not Available | Positive | 3258766 - 3258839 | Not Available |
| hypothetical protein | DXC16_14795 | Not Available | Positive | 3258980 - 3259081 | 3624.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

