Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide biosynthesis protein | DXC16_14700 | Not Available | Negative | 3236268 - 3238169 | 72772.3 |
| upxy family transcription antiterminator | DXC16_14705 | Not Available | Negative | 3238205 - 3238750 | 20947.9 |
| site-specific integrase | DXC16_14710 | Not Available | Negative | 3239290 - 3240486 | 46432.0 |
| magnesium and cobalt transport protein cora | DXC16_14715 | Not Available | Positive | 3241170 - 3242210 | 40225.7 |
| lrp/asnc family transcriptional regulator | DXC16_14720 | Not Available | Negative | 3242235 - 3242705 | 17952.8 |
| hypothetical protein | DXC16_14725 | Not Available | Positive | 3242897 - 3243322 | 15903.2 |
| deda family protein | DXC16_14730 | Not Available | Positive | 3243462 - 3244106 | 24543.7 |
| duf47 domain-containing protein | DXC16_14735 | Not Available | Positive | 3244146 - 3244793 | 25196.3 |
| inorganic phosphate transporter | DXC16_14740 | Not Available | Positive | 3244810 - 3245823 | 36015.0 |
| hypothetical protein | DXC16_14745 | Not Available | Positive | 3245962 - 3246324 | 13833.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

