Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_14590 | Not Available | Positive | 3219803 - 3221572 | 68121.0 |
| kila-n domain-containing protein | DXC16_14595 | Not Available | Negative | 3221697 - 3222503 | 31002.3 |
| hypothetical protein | DXC16_14600 | Not Available | Negative | 3222609 - 3223208 | 23199.0 |
| relaxase | DXC16_14605 | Not Available | Negative | 3223215 - 3224426 | 46120.1 |
| metalloproteinase | DXC16_14610 | Not Available | Negative | 3224440 - 3224856 | 15887.0 |
| hypothetical protein | DXC16_14615 | Not Available | Negative | 3225076 - 3225525 | 16618.0 |
| merr family transcriptional regulator | DXC16_14620 | Not Available | Negative | 3225552 - 3225881 | 12266.8 |
| hypothetical protein | DXC16_14625 | Not Available | Negative | 3225924 - 3227246 | 51140.7 |
| hypothetical protein | DXC16_14630 | Not Available | Negative | 3227257 - 3228573 | 51282.1 |
| duf4134 domain-containing protein | DXC16_14640 | Not Available | Negative | 3229002 - 3229355 | 12828.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

