Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_14530 | Not Available | Negative | 3208760 - 3209308 | 20860.8 |
| relaxase | DXC16_14535 | Not Available | Negative | 3209328 - 3210593 | 47096.3 |
| hypothetical protein | DXC16_14540 | Not Available | Negative | 3210590 - 3210985 | 15309.5 |
| hypothetical protein | DXC16_14545 | Not Available | Negative | 3211216 - 3212058 | 30795.5 |
| dna-binding protein | DXC16_14550 | Not Available | Negative | 3212163 - 3212606 | 17070.4 |
| site-specific integrase | DXC16_14555 | Not Available | Negative | 3212632 - 3213771 | 43352.5 |
| dna-binding protein | DXC16_14560 | Not Available | Negative | 3214111 - 3214836 | 27474.1 |
| duf4133 domain-containing protein | DXC16_14570 | Not Available | Negative | 3216603 - 3216896 | 10564.3 |
| sh3 domain-containing protein | DXC16_14580 | Not Available | Positive | 3218052 - 3218891 | 31089.2 |
| energy transducer tonb | DXC16_14585 | Not Available | Positive | 3218924 - 3219793 | 32226.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

