Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific dna-methyltransferase | DXC16_14475 | Not Available | Negative | 3197392 - 3198162 | 29635.7 |
| hypothetical protein | DXC16_14480 | Not Available | Negative | 3198373 - 3199098 | 27950.4 |
| hypothetical protein | DXC16_14485 | Not Available | Negative | 3199095 - 3201626 | 95912.3 |
| hypothetical protein | DXC16_14490 | Not Available | Negative | 3201631 - 3202269 | 25431.6 |
| conjugal transfer protein trag | DXC16_14495 | Not Available | Negative | 3202269 - 3203615 | 52215.5 |
| hypothetical protein | DXC16_14500 | Not Available | Positive | 3204378 - 3204818 | 15812.9 |
| upxy family transcription antiterminator | DXC16_14505 | Not Available | Positive | 3205534 - 3206214 | 25150.4 |
| cys-xaa-xaa-xaa repeat radical sam target protein | DXC16_14510 | Not Available | Positive | 3206254 - 3206484 | 8152.83 |
| 23s rrna (adenine(2058)-n(6))-methyltransferase erm(f) | DXC16_14515 | Not Available | Positive | 3206514 - 3207314 | 30269.3 |
| hypothetical protein | DXC16_14525 | Not Available | Positive | 3208140 - 3208502 | 14227.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

