Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombination protein recr | DXC16_01115 | Not Available | Negative | 207680 - 208297 | 22458.3 |
| sodium:solute symporter | DXC16_01120 | Not Available | Positive | 208376 - 209857 | 55350.8 |
| gtp-binding protein | DXC16_01125 | Not Available | Positive | 209823 - 210425 | 23034.9 |
| hepn domain-containing protein | DXC16_01135 | Not Available | Negative | 212994 - 213395 | 15666.6 |
| nucleotidyltransferase domain-containing protein | DXC16_01140 | Not Available | Negative | 213392 - 213700 | 11591.2 |
| aaa family atpase | DXC16_01145 | Not Available | Negative | 213883 - 215451 | 59945.5 |
| duf86 domain-containing protein | DXC16_01150 | Not Available | Negative | 215576 - 215968 | 15191.7 |
| dna polymerase subunit beta | DXC16_01155 | Not Available | Negative | 215961 - 216254 | 11114.5 |
| hypothetical protein | DXC16_01160 | Not Available | Negative | 216332 - 216529 | 7933.8 |
| virulence protein e | DXC16_01165 | Not Available | Positive | 216804 - 217469 | 25080.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

