Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon protein tran | DXC16_14425 | Not Available | Negative | 3190473 - 3191318 | 32070.7 |
| trna (adenine-n(6)-)-methyltransferase | DXC16_14430 | Not Available | Negative | 3191331 - 3191930 | 23257.0 |
| hypothetical protein | DXC16_14435 | Not Available | Negative | 3191980 - 3192315 | 13159.7 |
| conjugative transposon protein tram | DXC16_14440 | Not Available | Negative | 3192328 - 3193500 | 43203.1 |
| adenine methyltransferase | DXC16_14445 | Not Available | Negative | 3193484 - 3193966 | 18241.9 |
| hypothetical protein | DXC16_14450 | Not Available | Negative | 3193981 - 3194352 | 14433.4 |
| conjugative transposon protein trak | DXC16_14455 | Not Available | Negative | 3194365 - 3194979 | 23609.8 |
| hypothetical protein | DXC16_14460 | Not Available | Negative | 3194986 - 3195405 | 17258.9 |
| hypothetical protein | DXC16_14465 | Not Available | Negative | 3195405 - 3196538 | 42015.2 |
| duf5045 domain-containing protein | DXC16_14470 | Not Available | Negative | 3196553 - 3197323 | 28587.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

