Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_14325 | Not Available | Positive | 3174119 - 3174586 | 17242.5 |
| type vi secretion system contractile sheath protein tssc | DXC16_14330 | Not Available | Positive | 3174599 - 3175978 | 52717.4 |
| hypothetical protein | DXC16_14335 | Not Available | Positive | 3176091 - 3176705 | 23236.6 |
| hypothetical protein | DXC16_14340 | Not Available | Positive | 3176711 - 3177283 | 21981.5 |
| tetr/acrr family transcriptional regulator | DXC16_14345 | Not Available | Positive | 3177853 - 3178629 | 30174.4 |
| single-stranded dna-binding protein | DXC16_14350 | Not Available | Positive | 3179412 - 3179825 | 15105.8 |
| para family protein | DXC16_14355 | Not Available | Positive | 3180064 - 3180819 | 27419.8 |
| hypothetical protein | DXC16_14360 | Not Available | Positive | 3180826 - 3181080 | 9467.61 |
| atp-binding protein | DXC16_14365 | Not Available | Negative | 3181151 - 3182470 | 51241.9 |
| hypothetical protein | DXC16_14370 | Not Available | Positive | 3182569 - 3182928 | 13881.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

