Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_14225 | Not Available | Negative | 3150616 - 3150942 | 12710.2 |
| hypothetical protein | DXC16_14230 | Not Available | Negative | 3150988 - 3151242 | 9356.24 |
| type iv secretion protein rhs | DXC16_14235 | Not Available | Negative | 3151387 - 3155148 | 139369.0 |
| hypothetical protein | DXC16_14240 | Not Available | Negative | 3155158 - 3156063 | 35167.0 |
| type iv secretion protein rhs | DXC16_14245 | Not Available | Negative | 3156070 - 3156795 | 27399.7 |
| hypothetical protein | DXC16_14250 | Not Available | Negative | 3156860 - 3157147 | 11096.7 |
| hypothetical protein | DXC16_14255 | Not Available | Negative | 3157113 - 3158456 | 51243.6 |
| type iv secretion protein rhs | DXC16_14260 | Not Available | Negative | 3158496 - 3160259 | 63174.2 |
| type vi secretion system needle protein hcp | DXC16_14265 | Not Available | Negative | 3160370 - 3160765 | 14749.5 |
| hypothetical protein | DXC16_14270 | Not Available | Negative | 3161280 - 3162083 | 30935.4 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

