Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5119 domain-containing protein | DXC16_14060 | Not Available | Positive | 3128214 - 3129134 | 34044.0 |
| fimbrillin family protein | DXC16_14065 | Not Available | Positive | 3129216 - 3130385 | 43032.4 |
| hypothetical protein | DXC16_14070 | Not Available | Negative | 3130574 - 3130831 | 9309.24 |
| para family protein | DXC16_14075 | Not Available | Negative | 3130836 - 3131594 | 27555.5 |
| hypothetical protein | DXC16_14080 | Not Available | Positive | 3131881 - 3132210 | 12743.1 |
| dna-binding protein | DXC16_14085 | Not Available | Positive | 3132214 - 3133050 | 32322.8 |
| dna resolvase | DXC16_14090 | Not Available | Positive | 3133292 - 3133930 | 23938.0 |
| sensor histidine kinase | DXC16_14095 | Not Available | Negative | 3134169 - 3134648 | 17607.1 |
| radical sam mobile pair protein b | DXC16_14100 | Not Available | Negative | 3134697 - 3135572 | 34028.9 |
| radical sam mobile pair protein a | DXC16_14105 | Not Available | Negative | 3135569 - 3136237 | 26030.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

