Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_14000 | Not Available | Positive | 3117836 - 3118084 | 9679.79 |
| hypothetical protein | DXC16_14005 | Not Available | Positive | 3118059 - 3118565 | 19585.0 |
| hypothetical protein | DXC16_14010 | Not Available | Positive | 3118833 - 3119342 | 18248.9 |
| type ii toxin-antitoxin system hipa family toxin | DXC16_14020 | Not Available | Negative | 3119756 - 3121282 | 58020.2 |
| xre family transcriptional regulator | DXC16_14025 | Not Available | Negative | 3121272 - 3121592 | 12315.2 |
| type ii toxin-antitoxin system hipa family toxin | DXC16_14030 | Not Available | Negative | 3121692 - 3123281 | 60670.4 |
| helix-turn-helix domain-containing protein | DXC16_14035 | Not Available | Negative | 3123274 - 3123624 | 13369.6 |
| atp-binding protein | DXC16_14045 | Not Available | Positive | 3124040 - 3125320 | 49138.9 |
| luxr family transcriptional regulator | DXC16_14050 | Not Available | Negative | 3125626 - 3126684 | 40748.3 |
| duf3575 domain-containing protein | DXC16_14055 | Not Available | Positive | 3126985 - 3128217 | 47142.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

