Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase/dehydratase family protein | DXC16_13945 | Not Available | Negative | 3107537 - 3108514 | 36429.6 |
| hypothetical protein | DXC16_13950 | Not Available | Positive | 3108508 - 3108711 | 7823.87 |
| capsular biosynthesis protein | DXC16_13955 | Not Available | Negative | 3108753 - 3109469 | 27479.5 |
| chromosome partitioning protein para | DXC16_13960 | Not Available | Negative | 3109557 - 3111947 | 89272.3 |
| polysaccharide export protein | DXC16_13965 | Not Available | Negative | 3111964 - 3112755 | 29125.4 |
| undecaprenyl/decaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphate transferase | DXC16_13970 | Not Available | Negative | 3112768 - 3113889 | 41468.7 |
| upxy family transcription antiterminator | DXC16_13975 | Not Available | Negative | 3113964 - 3114542 | 22512.7 |
| site-specific integrase | DXC16_13980 | Not Available | Negative | 3115413 - 3116633 | 47433.2 |
| duf2958 domain-containing protein | DXC16_13990 | Not Available | Positive | 3117201 - 3117512 | 11771.1 |
| hypothetical protein | DXC16_13995 | Not Available | Positive | 3117586 - 3117822 | 9563.59 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

