Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | DXC16_13690 | Not Available | Negative | 3060628 - 3061617 | 38644.7 |
| glycosyltransferase | DXC16_13695 | Not Available | Positive | 3061863 - 3063179 | 50502.2 |
| abc transporter atp-binding protein | DXC16_13700 | Not Available | Positive | 3063237 - 3065075 | 68820.3 |
| hypothetical protein | DXC16_13710 | Not Available | Positive | 3065924 - 3066115 | 6879.01 |
| pcfk-like protein | DXC16_13715 | Not Available | Positive | 3066112 - 3066522 | 15531.6 |
| hypothetical protein | DXC16_13720 | Not Available | Positive | 3066524 - 3067771 | 49284.0 |
| hypothetical protein | DXC16_13725 | Not Available | Negative | 3067871 - 3068356 | 18077.0 |
| hypothetical protein | DXC16_13730 | Not Available | Negative | 3068410 - 3069435 | 39568.9 |
| hypothetical protein | DXC16_13735 | Not Available | Negative | 3069571 - 3069990 | 15091.9 |
| conjugal transfer protein trag | DXC16_13740 | Not Available | Negative | 3070013 - 3071959 | 72900.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

