Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| u32 family peptidase | DXC16_13640 | Not Available | Positive | 3044038 - 3045300 | 47014.9 |
| ragb/susd family nutrient uptake outer membrane protein | DXC16_13645 | Not Available | Negative | 3045588 - 3047138 | 58655.7 |
| tonb-dependent receptor | DXC16_13650 | Not Available | Negative | 3047154 - 3050240 | 114197.0 |
| arginine--trna ligase | DXC16_13655 | Not Available | Positive | 3050849 - 3052669 | 68001.7 |
| ribonuclease h | DXC16_13660 | Not Available | Positive | 3052670 - 3053296 | 23847.5 |
| alkaline phosphatase family protein | DXC16_13665 | Not Available | Positive | 3053312 - 3055138 | 68082.1 |
| glycosyltransferase family 39 protein | DXC16_13670 | Not Available | Negative | 3055222 - 3056946 | 65330.9 |
| gtra family protein | DXC16_13675 | Not Available | Positive | 3057033 - 3057407 | 14231.0 |
| glycosyltransferase | DXC16_13680 | Not Available | Positive | 3057444 - 3058391 | 36580.4 |
| lta synthase family protein | DXC16_13685 | Not Available | Negative | 3058422 - 3060449 | 77422.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

