Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s9 family peptidase | DXC16_13590 | Not Available | Negative | 3030838 - 3033051 | 83610.4 |
| rna methyltransferase | DXC16_13595 | Not Available | Negative | 3033058 - 3034506 | 56204.3 |
| type ii toxin-antitoxin system hicb family antitoxin | DXC16_13600 | Not Available | Negative | 3035018 - 3035209 | 7388.35 |
| serine acetyltransferase | DXC16_13605 | Not Available | Negative | 3035360 - 3036268 | 32799.2 |
| ribonuclease r | DXC16_13610 | Not Available | Negative | 3036569 - 3038716 | 81953.4 |
| cation transporter | DXC16_13615 | Not Available | Positive | 3038847 - 3039749 | 32965.4 |
| nad(p)-dependent oxidoreductase | DXC16_13620 | Not Available | Positive | 3039760 - 3040806 | 40078.3 |
| phosphatase pap2 family protein | DXC16_13625 | Not Available | Positive | 3040797 - 3041774 | 37786.7 |
| duf2807 domain-containing protein | DXC16_13630 | Not Available | Positive | 3041951 - 3042802 | 29119.2 |
| trna dihydrouridine synthase dusb | DXC16_13635 | Not Available | Negative | 3042898 - 3043887 | 37212.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

