Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase family protein | DXC16_13540 | Not Available | Negative | 3016650 - 3017261 | 24627.9 |
| duf2723 domain-containing protein | DXC16_13545 | Not Available | Negative | 3017332 - 3020736 | 129125.0 |
| metal abc transporter atp-binding protein | DXC16_13550 | Not Available | Negative | 3021197 - 3021964 | 28695.6 |
| zinc abc transporter substrate-binding protein | DXC16_13555 | Not Available | Negative | 3021974 - 3022879 | 34053.5 |
| arac family transcriptional regulator | DXC16_13560 | Not Available | Positive | 3023553 - 3024050 | 19135.2 |
| hypothetical protein | DXC16_13565 | Not Available | Positive | 3024108 - 3027116 | 110556.0 |
| sam-dependent methyltransferase | DXC16_13570 | Not Available | Negative | 3027469 - 3028152 | 26029.9 |
| deda family protein | DXC16_13575 | Not Available | Negative | 3028157 - 3028624 | 17015.3 |
| hypothetical protein | DXC16_13580 | Not Available | Negative | 3028600 - 3029535 | 35926.8 |
| phosphoribosylamine--glycine ligase | DXC16_13585 | Not Available | Negative | 3029554 - 3030822 | 45595.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

